Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015947029.1_cds_XP_016488923.1_79502
CDS Infomation

[gene=LOC107808875] [db_xref=GeneID:107808875] [protein=rubisco accumulation factor 2, chloroplastic-like] [protein_id=XP_016488923.1] [location=complement(2490..3854)] [gbkey=CDS]
Sequence

ATGTTTTCTCTCACTGTAAACTCCCCTAAACCTCTATCTCTCTCCACCCCATTTCTCCCT
ACCCACCCCCACCCCCTACCCTCCATAACCCATAAACCAAATCTCAATCCAAAACCCATA
ACTGCACTCATAATTCCTCCTTCCTCAGGCCAACAACAGCAATATTCAACCCAACAACAA
CAACAGCAACAACTTTATCAGCCTTTTAGACCTCCTCCTCCACTTCTCCCACCCAAATTC
CGCAATCTAGACACAAATTCAAAGCTTGAAGTTTTAGCTAACCGCCTTGGCCTTTGGTAT
GAGTATGCTCCTTTAATACCTTCTTTAACAAGAGAAGGTTTCACTCCTTCAACTCTTGAG
GAAATCACTGGCCTTACTGGAGTTGATCAGAATCGTTTGGTAGTTGCTGCCCAAGTTCGT
GACTCTCTTGTTGAGTCTGCTGCTTTGGACGAAGAAACGTTGTCGTATTTTGAATCTGGA
GGTGCTGAGTTATTATATGAAATTCGTTTGCTTAGTGCTAGGCAACGAGCTGATGCTGCA
ACTTTTTTAGTGAAGAATGGATTTGATGCAAAACAAGCTCAAGATTTAGCTAGAGCAATT
AAAGATTATCCGCGTAGACGTGTGGAGTATGGTTGGGATAAGTTTCATGGTGATTCTCCT
GGTGATTGTTTAGCTTTCATGTACTTTAGATTAGCTCAAGAATATGCTGCTGCAGCTTCT
GAGGATTTGAGGAGGTCGTCAATGGAGAAGGCTTTAGAAGTTGCTGAGTCTGAAAGTGCG
AGGAATTTGCTTGTAATGGAGCTAGAAGGTAATGAGGTTGCTAAAGAGAGTGTAAAAGAT
GATGGGGTGACAGTGCCTTTGGTGAGAATGAAGTTAGGGGAAGTAGCTGAGTCGACGATT
GTAGTGGTTTTGCCTGTTTGTAAGGCGGAGGGGAGGGATGTGGAGGTGGAGGCGGCGCCA
TGGGAATGTGGTGGCGTGGGGGATTTTGGTATCGTGGAGGCGGAGAAGGATTGGAGAAGA
TGGGTTGTTTTGCCAGGATGGCAACCTATCGCGGGGTTAGAGAGAGGTGGAGTTGCAGTG
TCGTTCAAGAGCGGGAACTTTTTGCCGTGGAGGGAGAAGAGCAAGTACAAGCAAGAGCCG
GTTTTGGTAGTGGCGGATAGGGGAAGGACAGAAGTGGCGTCGGAGGACGGGTTTTATTTG
GTGGTTGATGGTGGCAATGGGAGCAATGAGGAGGGATTGAAAGTGGAAAGAGGTTCTACT
TTGAAGAAAAGAGGGGTTGAACAAAGCTTGGGGATTGTGCTTATAGTAGTTAGGCCACCA
AAGTGGGAAAATGAAGATCAATTGGGTGAAGAAGATTGGGATTAA

Peptide Sequence

PEP ID

XP_016488923.1
PEP Infomation

PREDICTED: rubisco accumulation factor 2, chloroplastic-like [Nicotiana tabacum]
Sequence

MFSLTVNSPKPLSLSTPFLPTHPHPLPSITHKPNLNPKPITALIIPPSSGQQQQYSTQQQ
QQQQLYQPFRPPPPLLPPKFRNLDTNSKLEVLANRLGLWYEYAPLIPSLTREGFTPSTLE
EITGLTGVDQNRLVVAAQVRDSLVESAALDEETLSYFESGGAELLYEIRLLSARQRADAA
TFLVKNGFDAKQAQDLARAIKDYPRRRVEYGWDKFHGDSPGDCLAFMYFRLAQEYAAAAS
EDLRRSSMEKALEVAESESARNLLVMELEGNEVAKESVKDDGVTVPLVRMKLGEVAESTI
VVVLPVCKAEGRDVEVEAAPWECGGVGDFGIVEAEKDWRRWVVLPGWQPIAGLERGGVAV
SFKSGNFLPWREKSKYKQEPVLVVADRGRTEVASEDGFYLVVDGGNGSNEEGLKVERGST
LKKRGVEQSLGIVLIVVRPPKWENEDQLGEEDWD

Transcript Sequence

Gene sequence data has not been registered.